antibody.graylab.jhu.edu
ROSIE: The Rosetta Online Server that Includes EveryoneROSIE Rosetta server based on www.rosettacommons.org engine
http://antibody.graylab.jhu.edu/
ROSIE Rosetta server based on www.rosettacommons.org engine
http://antibody.graylab.jhu.edu/
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ROSIE: The Rosetta Online Server that Includes Everyone | antibody.graylab.jhu.edu Reviews
https://antibody.graylab.jhu.edu
ROSIE Rosetta server based on www.rosettacommons.org engine
antibody.graylab.jhu.edu
[ROSIE] ERRASER Protocol
http://antibody.graylab.jhu.edu/erraser
Welcome to ROSIE Rosetta Online Server that Includes Everyone. Please cite the following article when referring to results from our ERRASER server:. Chou FC, Sripakdeevong P, Dibrov SM, Hermann T, Das R (2012) Correcting pervasive errors in RNA crystallography through enumerative structure prediction. Nature Methods Jan 2013. ROSIE is web front-end for Rosetta software suite. Developed by Sergey Lyskov, GrayLab at JHU.
[ROSIE] Antibody Protocol
http://antibody.graylab.jhu.edu/antibody
Welcome to ROSIE Rosetta Online Server that Includes Everyone. Please cite the following article when referring to results from our ROSIE server:. Sivasubramanian A, Sircar A, Chaudhury S, Gray JJ., "Toward high-resolution homology modeling of antibody Fv regions and application to antibody-antigen docking". Proteins. 2009 Feb 1;74(2):497-514. doi: 10.1002/prot.22309. Link. Marze NA, Gray JJ, "Improved Prediction of Antibody VL VH Orientation". Under review. Additional references of interest:.
[ROSIE] Ligand Docking Protocol
http://antibody.graylab.jhu.edu/ligand_docking
Welcome to ROSIE Rosetta Online Server that Includes Everyone. Rosetta Ligand Docking Protocol. Submit Ligand Docking task]. Ligand Docking Server Documentation]. Please cite the following article when referring to results from our ROSIE server:. Combs, S. A., Deluca, S. L., DeLuca, S. H., Lemmon, G. H., Nannemann, D. P., Nguyen, E. D., et al. (2013). Small-molecule ligand docking into comparative models with Rosetta. Nature Protocols, 8(7), 1277 1298. doi:10.1038/nprot.2013.074.
[ROSIE] FARFAR (RNA De Novo) Protocol
http://antibody.graylab.jhu.edu/rna_denovo
Welcome to ROSIE Rosetta Online Server that Includes Everyone. Rosetta FARFAR (RNA De Novo) Protocol. Please cite the following article when referring to results from our ROSIE server:. Das, R., Karanicolas, J., and Baker, D. (2010), "Atomic accuracy in predicting and designing noncanonical RNA structure". Nature Methods 7:291-294. Link. This is the primary citation for these algorithms]. PLoS One. 2013 May 22;8(5):e63906. doi: 10.1371/journal.pone.0063906. Print 2013. Link. For fragment assembly witout ...
[ROSIE] Supercharge Protocol
http://antibody.graylab.jhu.edu/supercharge
Welcome to ROSIE Rosetta Online Server that Includes Everyone. ROSIE is web front-end for Rosetta software suite. Developed by Sergey Lyskov, GrayLab at JHU.
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Vls3d - Modeling loops
http://www.vls3d.com/links/bioinformatics/3d-structure-prediction/modeling-loops
Doctoral school for therapeutic Innovation. Computational Biology and Chemistry. Protein, DNA, RNA, Glycan modeling. Protein-protein docking, template-based docking. Hotspots, Interace residues, PPI modulators. PPI databases, network. Binding pockets and ligand-pocket datasets. Peptides, antibodies, epitopes. Visualization - commercial tools. Chemistry toolkits and utilities. Manage collections - chemical space. ADMET- physchem predictions - related tools. Off-targets, drug repurposing. Template based lo...
Rosetta Design
http://rosettadesign.med.unc.edu/documentation.php
High resolution structure prediction and design software. Using anchoring motifs for the computational design of protein-protein interactions. Jacobs TM, Kuhlman B. Biochem Soc Trans. 2013 Oct 1;41(5):1141-5. Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design. The energies, structure and sequence output by RosettaDesign are placed in a pdb file. The pdb file has the following sections:. 1) coordinates of the design structure. Yes, if you specify a resfile which has NATRO as ...
Rosetta Design
http://rosettadesign.med.unc.edu/index.html
High resolution structure prediction and design software. Degenerate codon library optimizer. Using anchoring motifs for the computational design of protein-protein interactions. Jacobs TM, Kuhlman B. Biochem Soc Trans. 2013 Oct 1;41(5):1141-5. Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design. Computational protein design software. If you would like to use Rosetta.design, please register for an account. If you already have an account, you can login below.
Servers | RosettaCommons
https://www.rosettacommons.org/software/servers
The hub for Rosetta modeling software. The RosettaCommons offers many web-interface servers for the use of Rosetta, which usually allow small academic jobs for free or paid use for large or commercial projects Rosetta@cloud. Read more about Rosetta servers in the RosettaDesign blog. The Rosetta Online Server the Includes Everyone hosts several servers for combined computer power as a free resource for academic users. Protein Structure Prediction Server. Protein Sequence Design Server. Rosetta@cloud is a ...
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Antibody CL
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Catálogo de nuestras empresas representadas. Encárguenos distribuir su producción de anticuerpos. Producimos anticuerpos por encargo y comercializamos anticuerpos obtenidos por los laboratorios de investigación. KITS PROFESIONALES DE DETECCIÓN RÁPIDA. Europa y otros paises. Puede contactar o realizar sus pedidos, al teléfono 56 [2] 2345765, o enviando un email a info@antibody.cl. Exbio: Promoción para PerCP-Cy 5.5 and PE-Cy 5 conjugados. Cosmo Bio., Ltd: Campaña de rebajas del 40% de Lectinas.
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ROSIE: The Rosetta Online Server that Includes Everyone
Welcome to ROSIE Rosetta Online Server that Includes Everyone. See more info at our About. Get Started with ROSIE. Server related documentation and info. This is a list of forums for Rosetta users to discuss problems with running Rosetta and is monitored by Rosetta developers. Latest Rosetta User Guide. Rosetta Protocols opened for academic users:. Rosetta Protocols under beta testing (for developers only):. ROSIE is web front-end for Rosetta software suite. Developed by Sergey Lyskov, GrayLab at JHU.
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