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apoinformaticaBasic Bioinformatics, science discussion for everyone who want to learn about computer science
http://apoinformatica.blogspot.com/
Basic Bioinformatics, science discussion for everyone who want to learn about computer science
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apoinformatica | apoinformatica.blogspot.com Reviews
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Basic Bioinformatics, science discussion for everyone who want to learn about computer science
apoinformatica.blogspot.com
apoinformatica: Coworkers
http://apoinformatica.blogspot.com/2008/08/colaboradores.html
Basic Bioinformatics, science discussion for everyone who want to learn about computer science. Friday, August 15, 2008. Tips, advises or news in bioinformatics useful in applied programs. Te mando la instrucción para sustituir de un archivo multifasta un. Perl -i.bak -pe s/ .* [/-/;s/ ]/ Nombre del archivo. Mis secuencias son de este tipo:. Gi 21219042 ref NP 624821.1 DEAD-box RNA-helicase [Streptomyces. Con el comando sed sustituyo gi por espacio en blanco y con el comando de. Y porque usar sed? Sed s/...
apoinformatica: August 2008
http://apoinformatica.blogspot.com/2008_08_01_archive.html
Basic Bioinformatics, science discussion for everyone who want to learn about computer science. Monday, August 18, 2008. Le lieu pour comment et parle de quelque chose du Science. Saturday, August 16, 2008. Friday, August 15, 2008. Tips, advises or news in bioinformatics useful in applied programs. El sitio del apolab para cuestiones de bioinformatica basica,. Subscribe to: Posts (Atom). Quotation of the Day. Noticias de hoy-La jornada. There was an error in this gadget. There was an error in this gadget.
apoinformatica: Apoinformatica
http://apoinformatica.blogspot.com/2008/08/apoinformatica.html
Basic Bioinformatics, science discussion for everyone who want to learn about computer science. Friday, August 15, 2008. El sitio del apolab para cuestiones de bioinformatica basica,. Para comenzar a trabajar. Los usuarios de mac pueden accesar por medio de un programa llamado terminal, localizado en la carpeta de utilidades dentro de aplicaciones. Para los usuarios PC, podemos accesar por medio de un programa llamado putty. Debemos bajar los siguientes software de comunicacion e instalarlos. Recomiendo ...
apoinformatica: Scripts
http://apoinformatica.blogspot.com/2008/08/scripts.html
Basic Bioinformatics, science discussion for everyone who want to learn about computer science. Saturday, August 16, 2008. I am working in design some script to copy files from a specific directory and put them into a new one directory, the structure could be. File(s) to be copied (it could a file with the files name to be copied, and if the format is a column, it will be ok). Address in(where are these files). Address out (destiny of the copied files). The script is #! Use File: Basename;. Die $scriptNa...
apoinformatica: R
http://apoinformatica.blogspot.com/2009/09/r.html
Basic Bioinformatics, science discussion for everyone who want to learn about computer science. Monday, September 28, 2009. This is the space for R basics, We are still learning about R, any suggest and collaboration for our comunity is welcome. First, you must learn R-lan:. Http:/ cran.r-project.org/manuals.html. Then start using Bioconductor:. Http:/ www.bioconductor.org/. October 6, 2009 at 10:28 PM. Http:/ faculty.ucr.edu/ tgirke/Documents/R BioCond/R BioCondManual.html. October 8, 2009 at 11:27 PM.
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Linxe's eye: Programming challenge - synthetic whole genome vcf
http://linxe-eye.blogspot.com/2012/09/programming-challenge-synthetic-whole.html
Genomics - Bioinformatic - Linux - Life - Fun. Wednesday, September 12, 2012. Programming challenge - synthetic whole genome vcf. I found in BioStar. An nice programming challenge. Here is my final code after reducing the initial solution:. Subscribe to: Post Comments (Atom). I'm a computational biologist living at Seattle, now assuming new tasks like be called Dad besides genomics analysis. Ubuntu Cluster - Master node. Ubuntu Cluster - Slave nodes. X-rays with a sticky tape. Maping TFBS in a sequence.
Linxe's eye: GuruPlug
http://linxe-eye.blogspot.com/2010/09/guruplug.html
Genomics - Bioinformatic - Linux - Life - Fun. Thursday, September 2, 2010. After a short wait, I received the GuruPlug, this little computer will host the GLiB website (currently down .). This is the pretty and elegant package:. It include only the GuruPlug, one eth cable and two electric adapters. The specifications and diagram are:. Of course this machine runs Linux (Debian Lenny) and it includes some basic services: Wifi server, CUPS, LAMP (lighttp MySQL PHP), ssh, samba. Some action in the terminal:.
Linxe's eye: August 2012
http://linxe-eye.blogspot.com/2012_08_01_archive.html
Genomics - Bioinformatic - Linux - Life - Fun. Wednesday, August 29, 2012. Selecting N random lines from a text file (Perl). In many situations I need to sample a few lines from a big file, the basic approach is to take just the first N. Lines in the file, but that isn't correct, a real sampling needs a random selection of points to avoid some bias. Here is my solution in the Perl language:. Friday, August 17, 2012. I see a really descriptive line:. Now I'm installing my usual packages and preparing the ...
Linxe's eye: September 2012
http://linxe-eye.blogspot.com/2012_09_01_archive.html
Genomics - Bioinformatic - Linux - Life - Fun. Friday, September 28, 2012. This is a really cool (but scary) real time tracking of hacking intents worldwide by the HoneyNet Project team: http:/ map.honeycloud.net/. Wednesday, September 12, 2012. Programming challenge - synthetic whole genome vcf. I found in BioStar. An nice programming challenge. Here is my final code after reducing the initial solution:. Subscribe to: Posts (Atom). Ubuntu Cluster - Master node. Ubuntu Cluster - Slave nodes. Petri foot&#...
Linxe's eye: January 2015
http://linxe-eye.blogspot.com/2015_01_01_archive.html
Genomics - Bioinformatic - Linux - Life - Fun. Friday, January 9, 2015. Pues ya es 2015 (felicidades a quienes deseen recibir una felicitación por el cambio de año). Después de mucho tiempo sin publicar y en espera de que varios procesos acaben, me doy a la tarea de desempolvar un poco este blog. No puedo detallar mucho de los proyectos que tengo en curso pero son varios y muy interesantes, pero dado que en este blog escribo más sobre Linux, este es mi estado actual de sistemas:. X-rays with a sticky tape.
Linxe's eye: Perl/Tk
http://linxe-eye.blogspot.com/2012/06/perltk.html
Genomics - Bioinformatic - Linux - Life - Fun. Thursday, June 7, 2012. Last weeks I have been working in some user interface to make easy some data integration and quick manual annotation for new repeat families. After spending some time understanding the problem and learning the annotation path, I reach a point to decide which framework do I need to create a simple GUI. I searched for options, like HTML5, QT, C#, even Java, nothing liked me. I take a look to the old Tk. Subscribe to: Post Comments (Atom).
Linxe's eye: PS3 cluster
http://linxe-eye.blogspot.com/2008/12/ps3-cluster.html
Genomics - Bioinformatic - Linux - Life - Fun. Wednesday, December 17, 2008. So do you have some PS3 and you're boring of play and watch Blue-Ray movies? You must know the PS3 is the most accessible. Based machine, why not use this computer problem in other areas beyond entrainment. In this PS3 ClusterGuide. You can build step-by-step your own cluster with PS3, the receipt:. 1 Take some PS3. 2 Interconnect it in a LAN. 4 Install cluster utils. 5 Learn to code in CELL- SDK. Luis D. Alcaraz. Yeah me too .
GRADO REACTIVO: The journal of Feelsynapsis
http://gradoreactivo.blogspot.com/2011/11/journal-of-feelsynapsis.html
Jueves, 10 de noviembre de 2011. The journal of Feelsynapsis. En el marco del " día mundial de la ciencia para la paz y el desarrollo. Les quiero recomendar una revista de divulgación científica en español, se trata de un interesante esfuerzo por llevar los temás actuales de interés científico al público hispanohablante en general. Tiene, a mi parecer, mucho mayor rigor que las "típicas pseudo-científicas": Conozca más y Quo. Y encima, es gratis. La revista lleva por título "The journal of feelsynapsis".
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apoinformatica
Basic Bioinformatics, science discussion for everyone who want to learn about computer science. Monday, September 28, 2009. This is the space for R basics, We are still learning about R, any suggest and collaboration for our comunity is welcome. Monday, August 18, 2008. Le lieu pour comment et parle de quelque chose du Science. Saturday, August 16, 2008. Friday, August 15, 2008. Tips, advises or news in bioinformatics useful in applied programs. Subscribe to: Posts (Atom). Quotation of the Day. There was...
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