biocreative2015.org
BioCreative Workshop 2015 | Sevilla, Spain - General Information - Topics
http://www.biocreative2015.org/general-information/topics
BioCreative: Critical Assessment of Information Extraction in Biology. Is a community-wide effort for evaluating text mining and information extraction systems applied to the biological domain. Built on the success of the previous BioCreative Challenge Evaluations and Workshops ( BioCreative I, II, II.5, III, 2012 workshop, and IV. Will host the BioCreative V Challenge. In Sevilla, Spain on September 9-11, 2015. Extraction of causal network information in Biological Expression Language. The importance an...
biocreative2015.org
BioCreative Workshop 2015 | Sevilla, Spain - Agenda
http://www.biocreative2015.org/agenda
How to get to Seville. Wednesday - September 9. Thursday - September 10. Friday - September 11. P1- Text mining applications: literature curation and beyond. P2- Crowdsourcing and curation. P3- Disease annotation and connections to the medical literature. Tuesday, August 25, 2015. Friday, September 4, 2015. USA Department of Energy Grant: DE-SC0010838. USA National Institute of General Medical Sciences Grant: R13-GM109648-01A1.
fnl.es
fnl.es · Projects
http://fnl.es/pages/projects.html
A command-line tool for developing statistical models that the can be used classify text (streams). The library is based on SciKit-Learn and provides classifiers that make sense to use for this scenario: Ridge Regression, various SVMs, Random Forest, Maximum Entropy/Logistic Regression, and Naïve Bayes classifiers. My ever evolving Python 3 API and CLI for supporting all types of text mining tasks I do. So far, this collection provides the following interfaces:. Form a suite to train and use an. With the...
icbo.cgrb.oregonstate.edu
BioCreative 2016 Submissions | International Conference on Biological Ontology & BioCreative
http://icbo.cgrb.oregonstate.edu/Biocreative_submission
Skip to main content. International Conference on Biological Ontology and BioCreative. August 1-4, 2016, Corvallis, Oregon, USA. Maps and Program at a Glance (PDF). Program at a glance. Day-1/Mon at a glance. Day-2/Tue at a glance. Day-3/Wed at a glance. Day-4/Thrs at a glance. Presentation and Poster guide. Monday afternoon and dinner. Keynote by Chris Daly. Keynote by Dennis Stevenson. Organigram talk by Barry Smith. On Mon, 03/14/2016 - 10:04. Text mining-facilitated models of curation. Application of...
biocreative2015.org
BioCreative Workshop 2015 | Sevilla, Spain - Agenda - Thursday - September 10
http://www.biocreative2015.org/agenda/thursday---september-10
Thursday - September 10. Keynote 2 Ioannis Xenarios. SIB Swiss Institute of Bioinformatics. Interactive curation track: overview and results. Interactive curation track: selected participant talks. Interactive curation track: round table discussion. Text mining applications: literature curation and beyond. Italian Pavilion - Isaac Newton Str.4. Chemical-disease relation track: overview and results. Chemical-disease relation track: selected participants talks. Short flash poster presentations.
biocreative2015.org
BioCreative Workshop 2015 | Sevilla, Spain - Agenda - Friday - September 11
http://www.biocreative2015.org/agenda/friday---september-11
Friday - September 11. BEL track: overview and results. BEL track: 3 selected participants talks. BEL track: round table discussion. Disease Annotation and connections to the medical literature. Italian Pavilion, Isaac Newton Street #4. BioCreative systems demo session. BioCreative V organizer panel. Lessons learned and future steps. How to get to Seville. Wednesday - September 9. Thursday - September 10. Friday - September 11. P1- Text mining applications: literature curation and beyond.
biocreative2015.org
BioCreative Workshop 2015 | Sevilla, Spain - Keynote Speakers
http://www.biocreative2015.org/keynote-speakers
To learn more about Ioannis Xenarios click here. Title of the lecture: Mining data for the contruction of lifelong disease trajectories. To learn more about Søren Brunak, click here. How to get to Seville. Wednesday - September 9. Thursday - September 10. Friday - September 11. P1- Text mining applications: literature curation and beyond. P2- Crowdsourcing and curation. P3- Disease annotation and connections to the medical literature. Tuesday, August 25, 2015. Friday, September 4, 2015.
biocreative2015.org
BioCreative Workshop 2015 | Sevilla, Spain - Panel Sessions - P1- Text mining applications: literature curation and beyond
http://www.biocreative2015.org/panel-sessions/p1--text-mining-applications:-literature-curation-and-beyond
P1- Text mining applications: literature curation and beyond. This panel will address the importance and practical use of text mining and information extraction systems for the extraction of biological and biomedical annotations and integration to existing life sciences knowledge bases as well as in literature/publishing sources. Cecilia Arighi, and Zhiyong Lu. Jo McEntyre, EMBL-EBI. Thomas Lemberger, EMBO. Natalie Cattlet, Selventa. Shawn Polson, University of Delaware. Natalie Catlett is a Senior Compu...
biocreative2015.org
BioCreative Workshop 2015 | Sevilla, Spain - Selected Talks
http://www.biocreative2015.org/selected-talks
Collaborative Biocurator Assistant Task (BioC). Wednesday, Sept 9. 09:50-10:15 Overview of the Collaborative BioCurator Assistant Task (BioC) Sun Kim. 10:15:10:30 Finding genetic interaction passages in biomedical literature Rezarta Islamaj Dogan. 10:45-11:00 NTTMUNSW BioC Modules for Recognizing and Normalizing Species and Gene/Protein Mentions in Full Text Articles Onkar Singh. 11:50-12:00 Round table discussion Don Comeau. CHEMDNER patents track: 3 selected participants talks. Wednesday, Sept 9. 11:00...
thehaguedeclaration.com
The Hague Declaration
http://thehaguedeclaration.com/cases
Access to Facts, Data and Ideas. In the Digital Age. Read & Sign the Declaration. History of the Declaration. Case Studies & Resources. Read the first-hand experiences of companies, universities and researchers who use TDM, plus reports giving further background. CASE #1 – Agroknow. The most important prerequisite for applying state-of-the-art text analysis techniques is the availability and openness of information regarding foodborne diseases, outbreaks, food alerts and recalls.’. The extraction of voca...