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Javier De-Las-Rivas web

Bioinformatics and Functional Genomics Research Group. Cancer Research Center (CiC-IBMCC, CSIC/USAL/IBSAL). Dr Javier DE LAS RIVAS. Dr Jose Manuel SÃ NCHEZ SANTOS - Dr. Manuel MARTÃ N MERINO. Santiago BUENO - Francisco CAMPOS - Oscar GONZÃ LEZ VELASCO - Elena SÃ NCHEZ. Sara AIBAR - Jesus ANTOLIN - Conrad DROSTE - Celia FONTANILLO - Juan HERNÃ NDEZ TORO. Carlos PRIETO - Alberto RISUEÃ O - Beatriz ROSÃ N. BIOINFORMATICS Projects and Tools developed (2006-2016):. Tool for non-redundant functional enrichment...

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Javier De-Las-Rivas web | bioinfow.dep.usal.es Reviews

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Bioinformatics and Functional Genomics Research Group. Cancer Research Center (CiC-IBMCC, CSIC/USAL/IBSAL). Dr Javier DE LAS RIVAS. Dr Jose Manuel SÃ NCHEZ SANTOS - Dr. Manuel MARTÃ N MERINO. Santiago BUENO - Francisco CAMPOS - Oscar GONZÃ LEZ VELASCO - Elena SÃ NCHEZ. Sara AIBAR - Jesus ANTOLIN - Conrad DROSTE - Celia FONTANILLO - Juan HERNÃ NDEZ TORO. Carlos PRIETO - Alberto RISUEÃ O - Beatriz ROSÃ N. BIOINFORMATICS Projects and Tools developed (2006-2016):. Tool for non-redundant functional enrichment...

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1 human genome project

2 protein analysis

3 sequence search

4 sequence alignments

5 protein structure

6 primary structure

7 secondary structure

8 tertiary structure

9 threading

10 metabolism

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salamanca spain,former members,alteredexpression,apid interactomes,functional gene networks,gatexplorer,probes,geneterm linker,human coexpression network,deco,path2enet,gene disease patterns,osteosarcoma and metastases,publications pubmed,ncbi,genomes

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Javier De-Las-Rivas web | bioinfow.dep.usal.es Reviews

https://bioinfow.dep.usal.es

Bioinformatics and Functional Genomics Research Group. Cancer Research Center (CiC-IBMCC, CSIC/USAL/IBSAL). Dr Javier DE LAS RIVAS. Dr Jose Manuel SÃ NCHEZ SANTOS - Dr. Manuel MARTÃ N MERINO. Santiago BUENO - Francisco CAMPOS - Oscar GONZÃ LEZ VELASCO - Elena SÃ NCHEZ. Sara AIBAR - Jesus ANTOLIN - Conrad DROSTE - Celia FONTANILLO - Juan HERNÃ NDEZ TORO. Carlos PRIETO - Alberto RISUEÃ O - Beatriz ROSÃ N. BIOINFORMATICS Projects and Tools developed (2006-2016):. Tool for non-redundant functional enrichment...

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AlteredExpression

http://bioinfow.dep.usal.es/AlteredExpression

AlteredExpression: Algorithm to find gene expression profiles of differential deregulation and identify families of desease-altered genes. Prieto C. 1. Rivas M. J. 2. Sanchez J. M. 2. Lopez-Fidalgo J. 2. And De Las Rivas J. 1. Bioinformatics and Functional Genomics Research Group, Cancer Research Center(CIC, USAL-CSIC) and 2. Department of Statistics, Faculty of Science (USAL), Salamanca, Spain. With control or healthy samples (i.e. the control state. Which includes the code of the algorithm and a series...

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GATExplorer (Genomic and Transcriptomic Explorer)

http://bioinfow.dep.usal.es/xgate

ENTER gene name,. Keyword or part of it. Access by GENOME COORDINATES. ENTER a pair of bp coordinates. ENTER a list of probesets. To get the corresponding. HG U133A 2 (human). HG U133 Plus 2 (human). Human Gene 1.0 (human). Human Exon 1.0 (human). Mouse Gene 1.0 (mouse). Mouse Exon 1.0 (mouse). Rat Gene 1.0 (rat). Rat Exon 1.0 (rat). SELECT a microarray and. A level of mapping. By PROBESET or PROBE). Xplorer) is a bioinformatic web platform that integrates a gene loci browser. For these species; (iii).

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Human gene coexpression

http://bioinfow.dep.usal.es/coexpression

Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles. Alberto RISUENO, Celia FONTANILLO and Javier DE LAS RIVAS. Bioinformatics and Functional Genomics Research Group, Cancer Research Center (CIC-IBMCC, USAL / CSIC), Salamanca, Spain. A group of coexpression data sets. Obtained at different values of correlation ( r. And crossvalidation ( N. Color plots of 3 dimensions that represent the Positive Predictive Value (PPV) calculated for each set of gene coexpressi...

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Bioinformatics and Functional Genomics Research Group. Cancer Research Center (CiC-IBMCC, CSIC/USAL/IBSAL). Dr Javier DE LAS RIVAS. Dr Jose Manuel SÃ NCHEZ SANTOS - Dr. Manuel MARTÃ N MERINO. Santiago BUENO - Francisco CAMPOS - Oscar GONZÃ LEZ VELASCO - Elena SÃ NCHEZ. Sara AIBAR - Jesus ANTOLIN - Conrad DROSTE - Celia FONTANILLO - Juan HERNÃ NDEZ TORO. Carlos PRIETO - Alberto RISUEÃ O - Beatriz ROSÃ N. BIOINFORMATICS Projects and Tools developed (2006-2016):. Tool for non-redundant functional enrichment...

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