germonline.org
ExportView
http://www.germonline.org/default/exportview
GermOnline based on Ensembl release 50 - Jul 2008. Export a different species. Select region/feature to Export. Choose at least one feature to export. Features must map to the current Germonline Golden tile path. Please note we will not export more than 5Mb. Bp upstream (to the left). Bp downstream (to the right). CSV (Comma Separated values). Pipmaker / zPicture format. Fields marked with *. Hosted by genouest.org. This product includes software developed by Ensembl.
cyanolyase.genouest.org
CyanoLyase
http://cyanolyase.genouest.org/blast
Blast 2.2.26. Blastp (protein query, protein databank). Blastx (nucleotide query, protein databank). Highly similar sequences (megablast). More dissimilar sequences (discontiguous megablast). Somewhat similar sequences (blastn). PSI-BLAST (Position-Specific Iterated BLAST). PHI-BLAST (Pattern Hit Initiated BLAST). DELTA-BLAST (Domain Enhanced Lookup Time Accelerated BLAST). PSI-BLAST, PHI-BLAST and DELTA-BLAST can be used to find distantly related sequences. FASTA format. Length is limited to 20Mb. RS991...
drmotifs.genouest.org
About | Dr Motifs – Blog
http://drmotifs.genouest.org/about
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Dr Motifs is a bioinformatics project launched by the GenOuest bioinformatics platform. Rennes, France) in March 2010. This project, led by Olivier Collin, is funded by IBiSA. And is conducted by Anthony Bretaudeau who is a developer on this platform. The aim of this project is to provide a complete platform for the study of motifs in biological data like nucleic or proteic sequences. Click here to cancel reply. Dr Motifs i...
cyanolyase.genouest.org
Chromophorylation of apoproteins in each strain
http://cyanolyase.genouest.org/pigmentation
Chromophorylation of apoproteins in each strain. Click here to see only marine picocyanobacteria]. This table lists the position of the cysteinyl binding sites (a consensus numbering is used for allophycocyanin, phycocyanin and phycoerythrin I; see Sidler, 1994. Shukla et al. in revision. Abbreviations: PCB, phycocyanobilin; PEB, phycoerythrobilin; PUB, phycourobilin; PVB, phycoviolobilin; BL, blue light; GL, green light; PBP, phycobiliproteins. Biochemically determined pigmentations are indicated in bold.
cyanolyase.genouest.org
Characterized or predicted function of phycobilin lyases
http://cyanolyase.genouest.org/functions
Characterized or predicted function of phycobilin lyases. This table lists the characterized (roman) or predicted (italics) function of phycobilin lyases in vivo, in terms of their:. Chromophore bound: phycocyanobilin (PCB) or phycoerythrobilin (PEB). Enzymatic activity: lyase or lyase-isomerase. Note that a PCB lyase-isomerase will bind a PCB and isomerize it into phycoviolibilin (PVB) and that a PEB lyase-isomerase will bind a PEB and isomerize it into phycourobilin (PUB). Note that marine Synechococcus.
tools.genouest.org
MEME Suite - Introduction
http://tools.genouest.org/tools/meme
The MEME Suite allows you to:. Discover motifs using MEME. DNA only) or GLAM2. On groups of related DNA or protein sequences,. Search sequence databases with motifs using MAST. A motif to all motifs in a database of motifs,. Motifs with Gene Ontology terms via their putative target genes, and. Analyse motif enrichment using SpaMo. To submit a query, click on one of the logos below or select "Submit A Job" from the menu at the left. Developed and maintained by:.
