gpcr.biocomp.unibo.it

The Prediction Servers @ Bologna Biocomputing Unit

Welcome to the BIOCOMP.UNIBO prediction server. TRAMPLE: the transmembrane protein labelling environment. PONGO : a web server for multiple predictions of all-alpha transmembrane proteins. Balanced subCellular Localization predictor. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Predictor of Protein Interaction Sites. Database of p...

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The Prediction Servers @ Bologna Biocomputing Unit | gpcr.biocomp.unibo.it Reviews

<META> DESCRIPTION

Welcome to the BIOCOMP.UNIBO prediction server. TRAMPLE: the transmembrane protein labelling environment. PONGO : a web server for multiple predictions of all-alpha transmembrane proteins. Balanced subCellular Localization predictor. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Predictor of Protein Interaction Sites. Database of p...

<META> KEYWORDS

1 Bologna Biocomputing Group

2 prediction

3 server

4 web predictors

5 membrane protein

6 betabarrell HMM

7 transmembrane alpha-helixes

8 Bonding State

9 Residue Contacts

10 single point protein mutation

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biocomputing unit,department of biology,wwwbiocomp unibo it,application servers,predictors,bacello,cchmm,cchmmprof,cornet,dcon,hippie,protease inhibitor engine,i mutant,i mutant 2 0,i mutant suite,ispred,k fold,phd snp,predgpi,speplip,snps&go,data bases

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The Prediction Servers @ Bologna Biocomputing Unit | gpcr.biocomp.unibo.it Reviews

https://gpcr.biocomp.unibo.it

Welcome to the BIOCOMP.UNIBO prediction server. TRAMPLE: the transmembrane protein labelling environment. PONGO : a web server for multiple predictions of all-alpha transmembrane proteins. Balanced subCellular Localization predictor. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Predictor of Protein Interaction Sites. Database of p...

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gpcr.biocomp.unibo.it

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BDM

http://gpcr.biocomp.unibo.it/biodec

2

Hybrid Inhibitors-Proteases Proteases-Inhibitors Engine

http://gpcr.biocomp.unibo.it/cgi/predictors/hippie/pred_hippie.cgi

Hybrid Inhibitors-Proteases Proteases-Inhibitors Engine! To submit your prediction ( and please wait. Bartoli L, Calabrese R, Fariselli P, Mita DG, Casadio R - A computational approach for detecting peptidases and their specific inhibitors at the genome level - BMC Bioinformatics 8:S3 (2007).

3

CORNET: Predictor of Residue Contacts in Proteins

http://gpcr.biocomp.unibo.it/cgi/predictors/cornet/pred_cmapcgi.cgi

Prediction of Residue Contacts in Proteins. The method is a neural network based predictor that uses as input correlated mutations, sequence conservation, predicted secondary structure and evolutionary information. This is an extension of the two previous methods. Olmea O. and Valencia A. (1997) Fold. Des. 2: S25-32; Fariselli P and Casadio R. (1999) Prot. Engng 12:15-21). Your e-mail address =. Sequence name [Optional] =. Select your protein database:. Put your input sequence.

4

ISPRED

http://gpcr.biocomp.unibo.it/ispred

Is a server for the prediction of interaction sites in proteins. Upload a PDB file. Upload the corresponding DSSP file. Upload the corresponding HSSP file. Chain name (or type '-'. If there is not one). For further information and bug report please contact: Piero Fariselli.

5

DCON: Predictor of Disulfide Connectivity in Proteins

http://gpcr.biocomp.unibo.it/cgi/predictors/cys-cys/pred_dconcgi.cgi

Predictor of Disulfide Connectivity in Proteins*. To run the program locally, download it here. Your e-mail address =. Number of cysteines (it must be even):. Paste your input in column format. To submit your query. Fariselli P, Casadio R - Prediction of disulfide connectivity in proteins - Bioinformatics 17:957-964 (2001).

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The Prediction Servers @ Bologna Biocomputing Unit

Welcome to the BIOCOMP.UNIBO prediction server. TRAMPLE: the transmembrane protein labelling environment. PONGO : a web server for multiple predictions of all-alpha transmembrane proteins. Balanced subCellular Localization predictor. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Predictor of Protein Interaction Sites. Database of p...

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Welcome to the BIOCOMP.UNIBO prediction server. TRAMPLE: the transmembrane protein labelling environment. PONGO : a web server for multiple predictions of all-alpha transmembrane proteins. Balanced subCellular Localization predictor. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Predictor of Protein Interaction Sites. Database of p...

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