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Ignet

The Ignet (Integrated gene network) project is a centrality- and ontology-based liteature discovery system for analyzing and visualizing biological gene interaction networks using all PubMed literature papers. Currently Ignet focuses on the literature mining of human gene interaction networks. Hur et al, 2012. Then such a CONDL strategy was proposed. Later we used the same CONDL strategy to study the fever and vaccine specific human gene interaction networks (Reference: Hur et al, 2012. Ozgur A, Xiang Z,...

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Ignet | ignet.hegroup.org Reviews

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The Ignet (Integrated gene network) project is a centrality- and ontology-based liteature discovery system for analyzing and visualizing biological gene interaction networks using all PubMed literature papers. Currently Ignet focuses on the literature mining of human gene interaction networks. Hur et al, 2012. Then such a CONDL strategy was proposed. Later we used the same CONDL strategy to study the fever and vaccine specific human gene interaction networks (Reference: Hur et al, 2012. Ozgur A, Xiang Z,...

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Ignet | ignet.hegroup.org Reviews

https://ignet.hegroup.org

The Ignet (Integrated gene network) project is a centrality- and ontology-based liteature discovery system for analyzing and visualizing biological gene interaction networks using all PubMed literature papers. Currently Ignet focuses on the literature mining of human gene interaction networks. Hur et al, 2012. Then such a CONDL strategy was proposed. Later we used the same CONDL strategy to study the fever and vaccine specific human gene interaction networks (Reference: Hur et al, 2012. Ozgur A, Xiang Z,...

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ignet.hegroup.org

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Ignet

http://ignet.hegroup.org/introduction.php

The number of neighbors of a node),. Function of the centralities of its neighbors),. Inverse sum of the distances from the node to the other nodes in the network), and. It has been requested by the community for us to develop a web server to store the analyzed data and provide a user-friendly web interface to query and visualize the analyzed data. To address this request, we have developed Ignet, a user-friendly web interface for the analyses of IFNG gene networks. An example of INO term is increase , w...

2

Ignet

http://ignet.hegroup.org/stat.php

Ignet has analyzed abstracts from millions of publications available in PubMed. Specifically, Ignet has found 573167 gene-gene interactions from 360283 sentences in 219004 PubMed publications. These interactions involve 11817 unique human genes. An example listed for gene interaction with IFNG:. 1473 genes associated with IFNG,. Top 50 genes ranked by four scores.

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Ignet

http://ignet.hegroup.org/disclaimer.php

The Ignet development team has made every effort possible to ensure that the algorithm implemented in Ignet and the information in the Ignet database are current and accurate. We accept no responsibility for any loss or injury resulting from the use of the Ignet system. The information in the Ignet database may not be completely up to date.

4

Ignet

http://ignet.hegroup.org/dignet/index.php

Dynamic Ignet Search Program. Keywords Search (throught PubMed search engine).

5

Ignet

http://ignet.hegroup.org/docs/docs.php

Ozgur A, Radev DR, He Y. Mining of vaccine-associated IFN-γ gene interaction networks using the Vaccine Ontology. Journal of Biomedical Semantics. In press. Ozgur A, Xiang Z, Radev DR, He Y. Literature-based discovery of IFN-gamma and vaccine-mediated gene interaction networks. 2010;2010:426479. Epub 2010 Jun 3. PMID: 20625487. Ozgur A, Radev DR, He Y. Mining of vaccine-associated IFN-γ gene interaction networks using the Vaccine Ontology.

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hegroup.org

Welcome to He Group Webpage

http://www.hegroup.org/index.php

Welcome to hegroup.org! Welcome to the home page of Dr. Yongqun Oliver He. S laboratory research group at the University of Michigan! We do both dry-lab (bioinformatics lab) and wet-lab (microbiology and immunology lab) biomedical research. Our primary bioinformatics research has many topics: (1) Ontology development. Dr He has initiated and led the development of several community-based ontologies, including Vaccine Ontology. VO), Ontology of Adverse Events. OAE), Ontology of Genes and Genomes. Vaccine ...

hegroup.org

He Group Bioinformatics Projects

http://www.hegroup.org/projects.html

We do both bioinformatics (dry-lab). A He Group bioinformatics projects:. Our bioinformatics research focus is to develop ontologies, ontology-based tools, databases, and analysis systems for addressign various biomedical questions. Our primary bioinformatics research has many topics:. Dr He has initiated and led the development of the community-based Vaccine Ontology. VO) and Ontology of Adverse Events. We have developed many ontology tools. With a focus on ontology-based literature mining approaches.

hegroup.org

He Group: FAQs

http://www.hegroup.org/faqs.php

1 Who is He Group? He Group is the research group in Dr. Yongqun Oliver He's laboratory located in the University of Michigan Medical School. He Group includes integrated wet-lab group and bioinformatics group. Our primary research interests are pathogen-host interactions ( PHI. And vaccine research and development (R&D). Please look our Projects. 2 What software programs developed in He Group can be used to study infectious diseases? Genomics data integration and literature annotation, and study of.

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Skip to main content. Fraud, Waste and Abuse. Council of the Inspectors General on Integrity and Efficiency; IGnet. Enterprise Risk Management (ERM) Working Group. Federal Audit Executive Council. Disaster Assistance Working Group. Annual OIG Community Awards. Senator John Glenn Video. Journal of Public Inquiry. Links and External Resources. Related Resources and Sites. Audit, Inspection and Evaluation Academy. Inspector General Criminal Investigator Academy. Leadership and Mission Support Academy. The C...

ignet.hegroup.org

Ignet

The Ignet (Integrated gene network) project is a centrality- and ontology-based liteature discovery system for analyzing and visualizing biological gene interaction networks using all PubMed literature papers. Currently Ignet focuses on the literature mining of human gene interaction networks. Hur et al, 2012. Then such a CONDL strategy was proposed. Later we used the same CONDL strategy to study the fever and vaccine specific human gene interaction networks (Reference: Hur et al, 2012. Ozgur A, Xiang Z,...

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