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GPS-Lipid - An Integrated Resource for Lipid Modifications

Last update: Sep. 24th, 2014. Most proteins in eukaryotic cell are post-transcriptionally modified by a wide range of chemical groups. Among those, the addition and removal of lipid groups to certain amino acids is a key modification that orchestrates the subcellular trafficking ( Draper. Linder and Deschenes, 2007. Signaling ( Smotrys and Linder, 2004;. And membrane association ( Levental. Linder and Deschenes, 2007. Signature at N-terminus, the N-myristoyl transferase (NMT) may catalyze the addition of...

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GPS-Lipid - An Integrated Resource for Lipid Modifications | lipid.biocuckoo.org Reviews
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Last update: Sep. 24th, 2014. Most proteins in eukaryotic cell are post-transcriptionally modified by a wide range of chemical groups. Among those, the addition and removal of lipid groups to certain amino acids is a key modification that orchestrates the subcellular trafficking ( Draper. Linder and Deschenes, 2007. Signaling ( Smotrys and Linder, 2004;. And membrane association ( Levental. Linder and Deschenes, 2007. Signature at N-terminus, the N-myristoyl transferase (NMT) may catalyze the addition of...
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GPS-Lipid - An Integrated Resource for Lipid Modifications | lipid.biocuckoo.org Reviews

https://lipid.biocuckoo.org

Last update: Sep. 24th, 2014. Most proteins in eukaryotic cell are post-transcriptionally modified by a wide range of chemical groups. Among those, the addition and removal of lipid groups to certain amino acids is a key modification that orchestrates the subcellular trafficking ( Draper. Linder and Deschenes, 2007. Signaling ( Smotrys and Linder, 2004;. And membrane association ( Levental. Linder and Deschenes, 2007. Signature at N-terminus, the N-myristoyl transferase (NMT) may catalyze the addition of...

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lipid.biocuckoo.org lipid.biocuckoo.org
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GPS-Lipid - Prediction of Lipid Modifications (S-Palmitoylation, N-Myristoylation, S-Farnesylation, S-Geranylgeranylation)

http://lipid.biocuckoo.org/webserver.php

Last update: May. 24th, 2016. Prediction of lipid modification sites. If your sequences 1000. Please download the local version. To predict. The local version is more powerful and has more functions. Enter sequence(s) in FASTA format. Will be automatically removed. You could input. Sequences in FASTA format. After lipid modification predictor model was well-trained, we performed an evaluation on this model. From the evaluation, three thresholds with High.

2

GPS-Lipid - Prediction of Lipid Modifications (S-Palmitoylation, N-Myristoylation, S-Farnesylation, S-Geranylgeranylation)

http://lipid.biocuckoo.org/index.php

Last update: May. 24th, 2016. Most proteins in eukaryotic cell are post-transcriptionally modified by a wide range of chemical groups. Among those, the addition and removal of lipid groups to certain amino acids is a key modification that orchestrates the subcellular trafficking ( Draper. Linder and Deschenes, 2007. Signaling ( Smotrys and Linder, 2004;. And membrane association ( Levental. Linder and Deschenes, 2007. Signature at N-terminus, the N-myristoyl transferase (NMT) may catalyze the addition of...

3

GPS-Lipid - Prediction of Lipid Modifications (S-Palmitoylation, N-Myristoylation, S-Farnesylation, S-Geranylgeranylation)

http://lipid.biocuckoo.org/userguide.php

Last update: May. 24th, 2016. In GPS-Lipid 1.0, we tried to make it powerful and convenient to be used. The online service and local packages were provided. This USAGE is prepared for the online service. For usage of local packages, please download the Manual. You can input one or multiple keywords (separated by space character) to search the GPS-Lipid database. The search fields including LipidDB ID, UniProt Accession, Protein Name, Protein Alias, Gene Name, Gene Alias, Species, and Function. Either the...

4

GPS-Lipid - Prediction of Lipid Modifications (S-Palmitoylation, N-Myristoylation, S-Farnesylation, S-Geranylgeranylation)

http://lipid.biocuckoo.org/links.php

Last update: May. 24th, 2016. A proteomics server of the Swiss Institute of Bioinformatics (SIB) which analyzes protein sequences and structures and two-dimensional gel electrophoresis (2-D Page electrophoresis). The server functions in collaboration with the European Bioinformatics Institute. ExPASy also produces the protein sequence knowledgebase, UniProtKB/Swiss-Prot, and its computer annotated supplement, UniProtKB/Trembl. 2 Palmitoylation site prediction:. 2 NBA-Palm 1.0. GPI Modification Site Predi...

5

GPS-Lipid - Prediction of Lipid Modifications (S-Palmitoylation, N-Myristoylation, S-Farnesylation, S-Geranylgeranylation)

http://lipid.biocuckoo.org/download.php

Last update: May. 24th, 2016. GPS-Lipid is ONLY freely available for academic research. And for commercial usage, please contact us. Please download GPS-Lipid installation package by clicking the link below:. Current Release: GPS-Lipid 1.0. GPS-Lipid 1.0 windows 20141205.exe. Mac OS X Platform. GPS-Lipid 1.0 macos 20141206.dmg. GPS-Lipid 1.0 unix x86 20141206.sh. GPS-Lipid 1.0 unix 20141206.sh. Linux/Unix TAR.GZ Archive. GPS-Lipid 1.0 unix 20141206.tar.gz. Please read the Manual.

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GPS-TSP 1.0 - Prediction of Tyrosine of Sulfation Sites

http://tsp.biocuckoo.org/download.php

Last update: Oct. 20th, 2014. GPS-TSP 1.0 Software Download. GPS-TSP 1.0 is ONLY freely available for academic research. And for commercial usage, please contact us. Please download GPS-TSP 1.0 installation package by clicking the link below:. Current Release: GPS-TSP 1.0.0. GPS-TSP 1 0 windows 20141127.exe. Mac OS X Platform. GPS-TSP 1 0 macos 20141127.dmg. GPS-TSP 1 0 unix 20141127.sh. Please read the Manual. 8251; Dataset Download:. British Indian Ocean Territory. Congo, the Democratic Republic of the.

tsp.biocuckoo.org tsp.biocuckoo.org

GPS-TSP 1.0 - Prediction of Tyrosine of Sulfation Sites

http://tsp.biocuckoo.org/userguide.php

Last update: Oct. 20th, 2014. In DOSS 1.0 database, we tried to make it more powerful and convenient to be used. The online service and local packages were provided. This USAGE is prepared for the online service of the database. The DOSS 1.0 provide the search option and advance options. ( DOSS ID. Please click on the Example button to search C3AR1 in Gene Name field. By clicking on the Submit button, the related doss proteins will be shown. Will be shown by clicking on the Submit button. You can browse ...

tsp.biocuckoo.org tsp.biocuckoo.org

GPS-TSP 1.0 - Prediction of Tyrosine of Sulfation Sites

http://tsp.biocuckoo.org/index.php

Last update: Oct. 20th, 2014. 8251; GPS-TSP INTRODUCTION:. Tyrosine sulfation is a ubiquitous PTM that predominantly modifies proteins in the secretory pathway ( Bundgaard. Walsh and Jefferis, 2006. And plays an important role in regulating chemotaxis ( Monigatti. Walsh and Jefferis, 2006. Inflammatory response ( Gao. And cell adhesion ( Stone. In animals, the sulfation is catalyzed by two closely related tyrosylprotein sulfotransferases (TPST-1 and TPST-2) ( Monigatti. Walsh and Jefferis, 2006. Experime...

csspalm.biocuckoo.org csspalm.biocuckoo.org

CSS-Palm - Palmitoylation Site Prediction

http://csspalm.biocuckoo.org/down.php

Last update: Feb. 27th, 2014. The CSS-Palm is ONLY freely available for academic research. And for commercial usage, please contact us. Please download CSS-Palm installation package by clicking the link below:. For the prediction of N-Myristoylation, S-Farnesylation and S-Geranylgeranylation sites, please use GPS-Lipid. Current Release: CSS-Palm 4.0. CSS-Palm 4.0 windows 20131223.exe. Mac OS X Platform. CSS-Palm 4.0 macos 20131223.dmg. CSS-Palm 4.0 unix 20131223.sh. Archive: CSS-Palm 3.0.

csspalm.biocuckoo.org csspalm.biocuckoo.org

CSS-Palm - Palmitoylation Site Prediction

http://csspalm.biocuckoo.org/database.php

Last update: Feb. 27th, 2014. PALM Database Online Service. Please input one or multiple keywords to search the Palmitoylation find the related information you need:. Palmitoylation database provides three online advance options, including advance search,browse, BLAST search. Please input a PROTEIN.

polo.biocuckoo.org polo.biocuckoo.org

GPS-Polo 1.0 - Prediction for Polo-like kinases

http://polo.biocuckoo.org/faq.php

Last update: Feb. 28th, 2014. How to use GPS-Polo 1.0 web service? Please visit the latest version of GPS-Polo 1.0 at http:/ polo.biocuckoo.org/down.php. I can't view the program properly, what should I do? Page or our website. However, for Mac OS, the GPS-Polo 1.0 could be used directly without any additional packages. Finally, if you can still not view the program properly, please send us an email and tell me the OS information on your computer. We will resolve the problem ASAP. And Dr. Jian Ren. By de...

polo.biocuckoo.org polo.biocuckoo.org

GPS-Polo 1.0 - Prediction for Polo-like kinases

http://polo.biocuckoo.org/down.php

Last update: Feb. 28th, 2014. GPS-Polo 1.0 is ONLY freely available for academic research. And for commercial usage, please contact us. Please download GPS-Polo 1.0 installation package by clicking the link below:. Current Release: GPS-Polo 1.0. GPS-Polo 1 0 windows 20110330.exe. Mac OS X Platform. GPS-Polo 1 0 macos 20110330.dmg. GPS-Polo 1 0 unix 20110330.sh. After download just double-click on the software package to begin installation. Then follow the user prompts through the installation.

gps.biocuckoo.org gps.biocuckoo.org

GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

http://gps.biocuckoo.org/userguide.php

Last update: Sep. 10th, 2014. 8251; User Guide:. How to use GPS 3.0 software? You can find the latest version of GPS 3.0 at http:/ gps.biocuckoo.org/download.php. Then download and install the GPS 3.0 software to your computer.Currently, GPS 3.0 is implemented in JAVA and could be installed on a computer with Windows/Linux/Unix/Mac OS . And we also wrote a manual for users which included in the installation package. What's the difference between simple prediction and comprehensive prediction? The value c...

tsp.biocuckoo.org tsp.biocuckoo.org

GPS-TSP 1.0 - Prediction of Tyrosine of Sulfation Sites

http://tsp.biocuckoo.org/online.php

Last update: Oct. 20th, 2014. To use GPS-TSP 1.0 in your web browser, you should install Sun Microsystems Java Runtime Environment (JRE). To get the latest version of the JRE, please visit the http:/ java.com. Page, and choose the proper JRE package based on your operating system and browser. For convenience, you can also download the JRE packages from our website. If your sequences 1000. Please download the local version. The local version is more powerful and has more functions.

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GPS-Lipid - An Integrated Resource for Lipid Modifications

Last update: Sep. 24th, 2014. Most proteins in eukaryotic cell are post-transcriptionally modified by a wide range of chemical groups. Among those, the addition and removal of lipid groups to certain amino acids is a key modification that orchestrates the subcellular trafficking ( Draper. Linder and Deschenes, 2007. Signaling ( Smotrys and Linder, 2004;. And membrane association ( Levental. Linder and Deschenes, 2007. Signature at N-terminus, the N-myristoyl transferase (NMT) may catalyze the addition of...

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