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TransTermHP

Finds rho-independent transcription terminators in bacterial genomes. Each terminator found by the program is assigned a confidence value that estimates its probability of being a true terminator. TransTermHP is described in:. Kunmi Ayanbule, and Steven Salzberg. Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake. A predecessor system, TransTerm, that used very different search and scoring algorithms is described in:. Last up...

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TransTermHP | transterm.ccb.jhu.edu Reviews
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Finds rho-independent transcription terminators in bacterial genomes. Each terminator found by the program is assigned a confidence value that estimates its probability of being a true terminator. TransTermHP is described in:. Kunmi Ayanbule, and Steven Salzberg. Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake. A predecessor system, TransTerm, that used very different search and scoring algorithms is described in:. Last up...
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TransTermHP | transterm.ccb.jhu.edu Reviews

https://transterm.ccb.jhu.edu

Finds rho-independent transcription terminators in bacterial genomes. Each terminator found by the program is assigned a confidence value that estimates its probability of being a true terminator. TransTermHP is described in:. Kunmi Ayanbule, and Steven Salzberg. Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake. A predecessor system, TransTerm, that used very different search and scoring algorithms is described in:. Last up...

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Software | Salzberg Lab

https://salzberg-lab.org/software

Computational biology and genomics @JHU. Opinion pieces and editorials. Next-gen sequence alignment and RNA-seq analysis tools. Is an ultrafast system for aligning short reads from next-generation sequencers to the human genome and any other genome. Bowtie2. Which supports gapped alignments, longer reads, and is equally fast, appeared in late 2011. The Bowtie project is led by Ben Langmead. Was developed primarily by Daehwan Kim. Assembles the reads from an RNA-seq experiment, producing full-length trans...

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TransTermHP

Finds rho-independent transcription terminators in bacterial genomes. Each terminator found by the program is assigned a confidence value that estimates its probability of being a true terminator. TransTermHP is described in:. And SL. Salzberg. Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake. A predecessor system, TransTerm, that used very different search and scoring algorithms is described in:. 1), 27-33 (2000). Last upd...

transterm.ccb.jhu.edu transterm.ccb.jhu.edu

TransTermHP

Finds rho-independent transcription terminators in bacterial genomes. Each terminator found by the program is assigned a confidence value that estimates its probability of being a true terminator. TransTermHP is described in:. Kunmi Ayanbule, and Steven Salzberg. Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake. A predecessor system, TransTerm, that used very different search and scoring algorithms is described in:. Last up...

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