compbiogrid.org
Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health
http://www.compbiogrid.org/microscopy_facility/microscopy_facility.html
Richard D. Berlin. Center for Cell Analysis and Modeling. Software and Additional Equipment. This is a combined confocal/FCS/NLO system, mounted on an inverted Axio Observer Z1. The 780 employs the spectral 32-channel QUASAR GaAsp detector allowing for spectral imaging, maximum sensitivity photon counting and Fluorescence Correlation Spectroscopy (FCS) as well as two adjacent PMT's. This system is equiped with the following laser lines:. 458, 488, and 514. Diode Pumped Solid State (DPSS). Spinning Disk C...
compbiogrid.org
Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health
http://www.compbiogrid.org/index.html
Richard D. Berlin. Center for Cell Analysis and Modeling. The Richard D. Berlin Center for Cell Analysis and Modeling (CCAM),. At UConn Health, is developing new approaches for in vivo measurements and manipulation of molecular events within the cell, and new computational approaches to organize such data into quantitative models. To investigate the relationships between experimental and compuational worlds, we use a tripartite approach described as:. For nonlinear, confocal, and widefield microscopy.
compbiogrid.org
Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health
http://www.compbiogrid.org/resources/ccam_software.html
Richard D. Berlin. Center for Cell Analysis and Modeling. CCAM Software is produced by the faculty and staff of CCAM. Our flagship application, the Virtual Cell. Serves as a National Resource for Cell Analysis and Modeling. The software below ranges from applications for analyzing FRAP and other image data, (Virtual FRAP Tool, Microfilament Detector, 5D Visualization MicroApp) to tools for generating models (BioNetGen, SyBiL) and model parameters (Gfit). User Guide and Tutorial.
cbit.uchc.edu
Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health
http://cbit.uchc.edu/people/people.html
Richard D. Berlin. Center for Cell Analysis and Modeling. CCAM Faculty, Post-doctoral Fellows, Graduate Students and Staff.
raymondwlt.wordpress.com
Virtual Cell Tutorial | Raymond Wong's BME Blog
https://raymondwlt.wordpress.com/2013/10/27/virtual-cell-tutorial
Raymond Wong's BME Blog. October 27, 2013. This time I have found some tutorials on how to use a cell simulation program called the “VCell”. It is found on its official Youtube channel “ VCellEducation. The above video is the very first tutorial, and during the process of building up a simulation, you may need to identify different domains (nucleus and cytosol) manually, and give the dimension of the cell structure to increase the accuracy of the result. Posted by Raymond Wong. I really appreciate your f...
icsb-2006.org
ICSB-2006 Conference
http://www.icsb-2006.org/tutorials/tutorials_descr.htm
Skip to: page content. Links on this page. Seventh International Conference on Systems Biology. Tutorial 8 and 9. Engineering design principles for biologists. Structural and functional analysis of signaling networks. New Mathematical Methods for Systems Biology. Tutorial on Systems Biology Toolbox for MATLAB. Pathway Modeling with Teranode XDA. Analyzing Biochemical Systems using the E-Cell System. Computational Cell Biology with the Virtual Cell. Advanced model analysis with Copasi. Pawan K. Dhar.
icsb-2007.net
ICSB 2007 :: Tutorials
http://www.icsb-2007.net/tutorials/index.html
Tutorials will be scheduled on Monday, October 1, prior to the main conference that runs from October 2 – 4, 2007. There are 18 tutorials, nine in the morning and nine in the afternoon. You may register. For up to two tutorials, one in the morning and one in the afternoon. Each tutorial is approximately 3 hrs in length. 9:00 am to 12:00 noon. 2:00 pm to 5:00 pm. What is Systems Biology? A Survey of Systems Biology Research. New Mathematical Methods for Systems Biology. Advanced Model Analysis with COPASI.
cbit.uchc.edu
Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health
http://cbit.uchc.edu/cam/cam.html
Richard D. Berlin. Center for Cell Analysis and Modeling. Cell Analysis and Modeling Training Program. The goals of the Cell Analysis and Modeling Training Program:. Develop a critical mass of trainees and scientists with interests in mathematical modeling and quantitative approaches in cell biology. Develop a diverse group of faculty mentors who will foster professional growth and interactions within the fields of chemistry, biophysics, computer science and the cell biology community.
