wildfire.bii.a-star.edu.sg

Wildfire

Wildfire and GEL 2.0 are available from the downloads page. Wildfire is a graphical tool for building workflows. It comes preconfigured to use EMBOSS programs as components for Bioinformatics workflows, and is extensible to support other components. Wildfire/GEL provides an integrated solution for building and executing workflows. Wildfire runs as an application on desktop and laptop platforms, and the GEL workflows can either run on the same machine or remotely on the Grid or on a cluster.

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Wildfire and GEL 2.0 are available from the downloads page. Wildfire is a graphical tool for building workflows. It comes preconfigured to use EMBOSS programs as components for Bioinformatics workflows, and is extensible to support other components. Wildfire/GEL provides an integrated solution for building and executing workflows. Wildfire runs as an application on desktop and laptop platforms, and the GEL workflows can either run on the same machine or remotely on the Grid or on a cluster.

<META> KEYWORDS

1 wildfire home

2 screenshots

3 documentation

4 faqs

5 download

6 acknowledgments

7 code and examples

8 francis tang

9 ho liang yoong

10 chua ching lian

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Wildfire | wildfire.bii.a-star.edu.sg Reviews

https://wildfire.bii.a-star.edu.sg

Wildfire and GEL 2.0 are available from the downloads page. Wildfire is a graphical tool for building workflows. It comes preconfigured to use EMBOSS programs as components for Bioinformatics workflows, and is extensible to support other components. Wildfire/GEL provides an integrated solution for building and executing workflows. Wildfire runs as an application on desktop and laptop platforms, and the GEL workflows can either run on the same machine or remotely on the Grid or on a cluster.

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wildfire.bii.a-star.edu.sg

1

Wildfire

http://wildfire.bii.a-star.edu.sg/faq.php

What do I need to download to build and run workflows by dragging and dropping? You will need to download Wildfire and. GEL Wildfire is the program that you use to draw your workflows. GEL is needed to run these workflows. I downloaded Wildfire 2.0 Windows Installer, and when I run it, I get the error "To help protect your computer, Windows has closed this program". What's wrong? Do I need a Unix machine? Do I really have to use. Do I need administrator privileges to install and run Wildfire or GEL?

2

Wildfire

http://wildfire.bii.a-star.edu.sg/index.php

Wildfire and GEL 2.0 are available from the downloads page. Wildfire is a graphical tool for building workflows. It comes preconfigured to use EMBOSS programs as components for Bioinformatics workflows, and is extensible to support other components. Wildfire/GEL provides an integrated solution for building and executing workflows. Wildfire runs as an application on desktop and laptop platforms, and the GEL workflows can either run on the same machine or remotely on the Grid or on a cluster.

3

Wildfire

http://wildfire.bii.a-star.edu.sg/documentation.php

Wildfire 2.0 Manual. GEL: Grid Execution Language. J Parallel and Distributed Computing 2005, 65(7):857-869. Wildfire: distributed, Grid-enabled workflow construction and execution. BMC Bioinformatics 2005, 6:69. S Biomedical Sciences Institutes. 30 Biopolis Street, #07-01 Matrix, S(138671).

4

Wildfire

http://wildfire.bii.a-star.edu.sg/screens.php

Wildfire has been preconfigured so that EMBOSS programs can be used as workflow components. GEL can execute workflows in parallel on Condor Grids, on SGE, LSF or PBS-based clusters, or on SMP machines. The Wildfire drawing canvas allows workflows to be constructed intuitively by dragging and dropping. Command-line options for various programs are presented using text-boxes, drop-down lists and buttons. S Biomedical Sciences Institutes. 30 Biopolis Street, #07-01 Matrix, S(138671).

5

Wildfire

http://wildfire.bii.a-star.edu.sg/getting.php

We recommend the following minimum system requirements for running Wildfire:. Pentium 4 CPU, 1.8GHz. Windows 2000/XP or Redhat Linux 7.3 (or similar). Java 1.4.2. GEL requires Java 1.4.2 and unix-like OS with GNU tools. It has been tested on. IA32: Redhat Linux 7.3, Fedora Core 1, LSF 5, OpenPBS, SGE 5.3, Condor 6.6.6. IA64: White Box Enterprise Linux 3.0, LSF 6. Sparc: Solaris 9 GNU. Alpha: Tru64 5.1 GNU, LSF 4.1. Current release (2.0/2.0). And GEL (free for non-profit research). GEL 20 (57.38MB).

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